PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00028340-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ERF
Protein Properties Length: 237aa    MW: 25640.5 Da    PI: 4.5072
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00028340-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43.1e-1774123155
                 AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                         ++y+GVr  +++g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a ++l+g
  WALNUT_00028340-RA  74 PKYRGVR--SRSGKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAVLALKG 123
                         79****6..668*********843...5**********************99988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.4E-1074123IPR001471AP2/ERF domain
CDDcd000183.48E-2874133No hitNo description
Gene3DG3DSA:3.30.730.102.1E-2675132IPR001471AP2/ERF domain
SuperFamilySSF541713.14E-1875133IPR016177DNA-binding domain
PROSITE profilePS5103220.25775131IPR001471AP2/ERF domain
SMARTSM003802.2E-2875137IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MANNPVNVRP DYPQPQVAVP RLSVQVPEAC FTTNVRQEET TPRPFATAFE DPSPRPVQSS  60
RASSGQQAAS GGSPKYRGVR SRSGKWVSEI REPRKTTRIW LGTYPTPEMA AAAYDVAVLA  120
LKGPDTFLNF PNSIVSYPVP ASTSASDIQA AAASAAEAMA RKPDTESTEE YPETRPSEKE  180
VTTGSSGPMG EEFIDEEELL NMPKLLVDMA QGMLVSPPRI ESKSSEDSGG DNLWSYV
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00558DAPTransfer from AT5G52020Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010662529.11e-67PREDICTED: ethylene-responsive transcription factor ERF027
SwissprotQ9FJ907e-52ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLF6HP681e-67F6HP68_VITVI; Putative uncharacterized protein
STRINGVIT_16s0100g00400.t014e-67(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.18e-41ERF family protein